Characterization of DNA degradation using direct current conductivity; dynamic dielectric relaxation techniques
The purpose of this study was to evaluate DNA degradation upon thermal heating using dielectric relaxation; direct current (DC) conductivity methods. Herring sperm DNA, human growth hormone (HgH) plasmid DNA,; secreted alkaline phosphatase (SEAP) plasmid DNA were used as the examples. DNA was heated at 80°C for 1 hour. The dielectric relaxation spectra as a function of the applied field frequency were measured for HgH DNA at 0.5 hours; at 1 hour. The frequency range covered was from 10 kHz to 100 kHz. The DC conductivity measurements were made for all 3 kinds of DNA at 4 time points: 0 hours, 0.5 hours, 0.75 hours,; 1 hour. At each time point the DC conductivity was measured for each sample as a function of concentration via water dilution. The results show that the dielectric relaxation method is less sensitive in characterizing heat-driven DNA degradation. Conversely, DC conductivity is very sensitive. The semiquantitative dependence of the conductivity upon heating suggests that DNA degradation involves more than plasmid DNA nicking. Double strand; single strand breaks may also occur. In addition, herring sperm DNA, HgH DNA,; SEAP DNA, though similar in their DC conductivity functional forms upon dilution, exhibit significant differences in their responses to sustained heating.
Jonathan I. Sheu1?Eric Y. Sheu2Email:ericsheu@comcast.net
[1] Acalanes High School, 1200 Pleasant Hill Rd, 94549 Lafayette, CA ;[2] 7 Olde Creek Place, 94549 Lafayette, CA
